CDS

Accession Number TCMCG066C34587
gbkey CDS
Protein Id XP_034572997.1
Location join(13241187..13241461,13241548..13241617,13241727..13241830,13242156..13242249,13242347..13242423,13242785..13242884,13243107..13243178,13243345..13243413,13243544..13243855)
Gene LOC117837468
GeneID 117837468
Organism Setaria viridis

Protein

Length 390aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034717106.1
Definition DNA excision repair protein ERCC-1 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category L
Description Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10849        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01524        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000014        [VIEW IN EMBL-EBI]
GO:0000109        [VIEW IN EMBL-EBI]
GO:0000110        [VIEW IN EMBL-EBI]
GO:0000710        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006294        [VIEW IN EMBL-EBI]
GO:0006296        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006312        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010213        [VIEW IN EMBL-EBI]
GO:0010224        [VIEW IN EMBL-EBI]
GO:0010332        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016888        [VIEW IN EMBL-EBI]
GO:0016893        [VIEW IN EMBL-EBI]
GO:0017108        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033683        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034644        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048256        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0070522        [VIEW IN EMBL-EBI]
GO:0070914        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACGGGGGAAGAGAGCAGCAGGGGCCGCCGGAGCGGCAGCCCGGCAAGAACCTGATCAAGATCCCGTCCTACCAGGAGGTCTTCGGCACTGGCGCCTCCTCCTCCTCCTCGACGCCGCCCTCCTACAACCCTCCTCTAGCCAGCGCCGGCGCCCCCGCCGCTTCATCCTCCTCTTCGTCATCGGGATCGTTCTCGCAGGCTTTCTCCTTCCTCAAGTCCTCCGAGTTCTACTCGCCTCCGCCGCCGCCTCCCCAACCCACCTCCACCCCGAGGCCGCCTCAGGCTAGCTCCTCCGCACCGGCACCCCAGAGCAAGAACGCCATTCTCGTCAGTCATAGGCAGAGAGGGAACCCTCTGCTGAAGCACATCAGAAATGCTAGGTGGACGTTCGCTGATGTCGTGCCGGACTATGTGCTCGGGCAATCGTCATGTGCGTTGTACTTAAGGTACCATCTTCTACATCCAGATTACTTGTATTACCGGATAAGGGAACTGCAGAAGAATTTCAGGCTCCGTGTCATCTTGTGCCATGTCGATGTTGAAGATGTAGTCAAGCCTTTGCATGAAATTACAAGAACAGCACTGCTGCATGACTGCACCCTCCTGTGCGGTTGGAGCCTGGAGGAATGTGGTCGGTACTTGGAAACTATCAAAGTGTATGAAAACAAGCCAGCTGACAGTATTCGTGAGCACACGGATAGTGACTATCTATCAAGGTTGACACATGCACTTACATCCATTCGGCATGTTAATAAAACAGATGTTGTCACACTCGGTTCATCTTTTGGGTCACTCTCACAAGTTATGAATGCTTCTATGGAGGAACTGGCTCGTTGCCCAGGAATTGGTGAGCGGAAGGTAAAACAACTTTATGATACTTTCCACGAGCCATTCAAACGGGTTTCTGCTCGCCCAAACCTTGTAGTGCCTGATACTCCCGACAGGGAGAAAGCATCAGGCCAACCTCCATCGACGAATGATAGCTCAGAAAATACAGCAGAGAAATCAGAGACATCCAAGAAGAAGAAAGGTTCCGACGTAAGGTCGGCCCTTACCACTGCCTTTGCCAAGTATTCGGAGAAGATCCGCAGCCAGAATGGTGACGCCGCAAACGAGGCTGGTGAAGGTGCTAGCAGCTCAAACATGGAAGATGGCAAGACCAAAGACTAG
Protein:  
MDGGREQQGPPERQPGKNLIKIPSYQEVFGTGASSSSSTPPSYNPPLASAGAPAASSSSSSSGSFSQAFSFLKSSEFYSPPPPPPQPTSTPRPPQASSSAPAPQSKNAILVSHRQRGNPLLKHIRNARWTFADVVPDYVLGQSSCALYLRYHLLHPDYLYYRIRELQKNFRLRVILCHVDVEDVVKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKVYENKPADSIREHTDSDYLSRLTHALTSIRHVNKTDVVTLGSSFGSLSQVMNASMEELARCPGIGERKVKQLYDTFHEPFKRVSARPNLVVPDTPDREKASGQPPSTNDSSENTAEKSETSKKKKGSDVRSALTTAFAKYSEKIRSQNGDAANEAGEGASSSNMEDGKTKD